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Water Splitting

Research in the Pantazis group centers on quantum inorganic and bioinorganic chemistry. Our focus is the study of the electronic structure and reactivity of metalloenzymes and more general of open-shell transition metal systems. A main research theme in our group has been the study of biological and artificial photosynthetic systems, often in close collaboration with experimental groups, with emphasis on reactions that lead to the production of solar fuels from water. We are particularly interested in understanding the fundamental principles behind biological and bioinspired water splitting. We develop and apply quantum chemical and multiscale computational methods that allow us to probe the details of the electronic structure, the magnetic and spectroscopic properties, and the function of polymetallic (bio)inorganic systems, with a view towards obtaining fundamental insights from biology and designing viable synthetic systems for artificial photosynthesis.

Dimitrios Pantazis

Dr. Dimitrios Pantazis

2018
Group Leader at the Max-Planck-Institut für Kohlenforschung
2011-2017
Group Leader at the Max Planck Institute for Chemical Energy Conversion
2007-2011
Postdoc at the University of Bonn, Germany
2006-2007
Postdoc at the University of Glasgow, UK
2006
Ph.d. (Chemistry) at the University of York, UK
2003
Diploma (Chemistry) at the Aristotle University of Thessaloniki, Greece
2010
Ernst-Haage Prize for Bioinorganic Chemistry
2006-2007
EPSRC postdoctoral research fellowship
2005
HPC-EUROPA scholarship for research stay at ICIQ, Tarragona
2002-2005
EPSRC postgraduate research scholarship
2004
EURESCO Young Scientist scholarship
2019
Organizer of the QBIC-V conference in Marseille, France
2019
Lecturer at the 2nd FrenchBIC Summer School on Methods for Studying Metals in Biology.
since 2018
Funding member and elected Communications Officer of the Quantum Bio-Inorganic Chemistry Society (www.qbicsoc.org)
since 2013
Principal organizer and lecturer at the Summer School “Spectroscopy and Electronic Structure of Transition Metal Complexes” (9/2017, 9/2016, 9/2015, 9/2014, 9/2013)
 

BmBF project MANGAN 03EK3545 (since 2015 – principal investigator): Development of site-selective spectroscopies and computational methods for the characterization of heterogeneous and homogeneous manganese water-splitting catalysts.

DAAD project 57445526 (since 2019 – principal investigator): Exchange project in collaboration with the group of Maylis Orio (Marseille, France) on the study of EPR properties of copper complexes.

ANR–DFG project “CuBISM”  (since 2019 – participating member): Combining Magnetic Spectroscopy and Modern Multireference Methods to Understand the Properties of Bio-Inspired and Enzymatic Multicopper Systems.

German–Israeli Foundation Proposal No. I-99-302.1-2018 (principal investigator): in collaboration  with Galia Maayan (Technion, Israel): Developing mechanistic understanding for the activity of biomimetic manganese-based water oxidation electrocatalysts.

DFG Cluster of Excellence RESOLV (since 2015 – external collaborating member): Accurate energetics of open-shell systems in solution using modern coupled-cluster methods.

Participant of COST action CM1305 ‘‘Explicit Control Over Spin-states in Technology and Biochemistry (ECOSTBio)’’

Research Topics

Natural and artificial photosynthesis

Natural and artificial photosynthesis

Photosynthetic organisms capture the energy of sunlight and store it in the chemical bonds of carbohydrates. Photosynthesis, the most important biochemical process on Earth, defines life as we know it by providing the building blocks of most living organisms and producing atmospheric oxygen. The main engine of the photosynthetic apparatus is the enzyme Photosystem II, where solar energy splits water into molecular oxygen, protons and electrons, providing the reducing equivalents subsequently employed in carbon fixation. At the heart of PS-II is the oxygen-evolving complex (OEC), the Mn4O5Ca functional unit that catalyzes the oxidation of water. Elucidating the chemistry that takes place at the OEC is central for efforts toward artificial photosynthesis, potentially enabling sustainable solar-driven hydrogen production from water.

Our research addresses foremost the problem of establishing firm correlations between structural features and spectroscopic properties. Accurate calculations of spectroscopic properties for potential structural models allow meaningful comparisons with data obtained, for example, from EPR/ENDOR and XAS experiments. To this end we develop methods for the calculation of spectroscopic observables and apply them in the study of the properties and reactivity of catalytic models that range in scale from small clusters to enzymes to surfaces, using a whole range of methods from ab initio and DFT to QM/MM and MD. The safe understanding of structure-property relationships forms the basis for deciphering (and subsequently controlling) catalytic reactivity. For these reasons a topic of special focus is to understand in detail how the various levels of description and interpretation correlate and give rise to a certain phenomenology.

Among the theoretical developments achieved so far are methodologies relevant to the calculation of EPR parameters such as hyperfine coupling constants (HFCs) for oligonuclear metal clusters of arbitrary shape and nuclearity. We have employed these methods in evaluations of models of the S2 state of the OEC, considering structural variations such as the bonding and connectivity within the inorganic Mn4O5Ca part of the OEC, the ligation modes of coordinating aminoacids, and the protonation states of Mn- and Ca-coordinated water molecules and oxo bridges. Given the wealth of state-selective information obtained on the OEC by modern spectroscopic methods, this approach has led to the definition of the topology of the OEC with unprecedented accuracy that is not achievable by methods such as protein crystallography.

Another example of how the interplay of computational and experimental spectroscopy can lead to firm conclusions regarding the electronic structure and chemical reactivity of an unknown species is the elucidation of the nature of a Mn complex resulting from activation of water. In that case the reference experimental information was the Mn pre-edge X-ray absorption spectrum (XAS) that contains information about the valence electronic structure of the metal. Calculations of the XAS pre-edge spectra enabled us to distinguish between protonated and unprotonated adducts and electromeric forms such as oxo and oxyl. These calculations are possible thanks to a recently calibrated TD-DFT protocol, while more recent theoretical advances include an RO-CIS approach.

 

Development of all-electron scalar relativistic basic sets

Development of all-electron scalar relativistic basic sets

Routine computational investigations of chemical systems containing elements beyond Kr are dominated by the use of effective core potentials (ECPs) because they reduce the size of the computational task while providing an easy, if approximate, way to account for the most important relativistic effects. However, they have their drawbacks and limitations, for example when there is a need to model a property that depends on the electron density near the nucleus or for topological analysis of electron densities. Therefore, either for validating the use of ECPs or for circumventing their inherent limitations, it is necessary to have all-electron basis sets that allow efficient calculations with the popular scalar relativistic Hamiltonians, such as the Zeroth Order Regular Approximation (ZORA), and the Douglas-Kroll-Hess (DKH) approach.
An answer to this need is the family of Segmented All-electron Relativistically Contracted (SARC) basis sets, constructed specifically for DFT treatments in conjunction with the DKH2 and ZORA Hamiltonians. The SARC basis sets are segmented CGTO sets of polarized triple-zeta quality. They present an efficient alternative to ECPs for routine DFT studies of large molecules and their performance has been benchmarked for both atomic and molecular properties.
Exponents are derived from relatively simple rules, using the radial expectation values from accurate atomic calculations as generator quantities. In contrast to non-relativistic basis sets, the SARC basis sets are flexible in the core region, with high exponents required by relativistic Hamiltonians. Polarization functions are added with the requirements of DFT in mind, building flexibility to the chemical valence space without introducing redundant angular momentum (correlation) functions.
Contraction coefficients are optimized separately for the DKH2 and ZORA Hamiltonians, because these two scalar relativistic approximations produce quite different shapes for the orbitals close to the nucleus. From the differences of DKH2 and ZORA radial distribution functions (figure shows differences for the Hg atom), it is readily seen that the ZORA potential is more attractive than DKH2. This issue is explicitly addressed with individually adapted contractions.

Typical applications of SARC basis sets include

  • Benchmarking effective core potentials before employing them in extended projects.
  • Molecular properties that depend on the density near the nucleus: NMR, Mössbauer, EPR, XAS, etc.
  • Topological analysis of electron densities with AIM and ELF.
  • Magnetic interactions in f-element-containing molecules, e.g. in 3d-4f single-molecule magnets.
  • Processes in lanthanide and actinide chemistry that involve electrons in f-orbitals (e.g. luminescence).

SARC basis sets are available for the third-row transition metals (5d series, Hf-Hg), the 6p elements (Tl-Rn), the lanthanides (4f series, La-Lu), and the actinides (5f series, Ac-Lr). All SARC basis sets for Z > 54 (along with corresponding auxiliary basis sets) are included in the ORCA program package, which also contains scalar relativistic recontractions of the Karlsruhe basis sets up to Xe.

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  • Dr. Juliana Cecilia De Mendonça Silva

    Dr. De Mendonça Silva, Juliana Cecilia

    PostDoc bis 31.12.2018

     

  • Dr. Miquel Alexandre Garcia-Ratés

    Dr. Garcia-Ratés, Miquel Alexandre

    +49 (0)208 306 - 2161

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  • Dr. Reza Ghafarian Shirazi

    Dr. Ghafarian Shirazi, Reza

    Doctoral Student

     

  • Dr. Dimitrios Pantazis

    Dr. Pantazis, Dimitrios

    +49 (0)208 306 - 2156

    dimitrios.pantazis((atsign))kofo.mpg.de

    to publications

  •  Christine Schulz

    Schulz, Christine

    +49 (0)208 306 - 2184

    christine.schulz((atsign))kofo.mpg.de

    to publications

  •  Abhishek Sirohiwal

    Sirohiwal, Abhishek

    +49 (0)208 306 - 2155

    abhishek.sirohiwal((atsign))kofo.mpg.de